6961 NIF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6961 chr_7 NIF superfamily 912267 915488 + NIF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449243 Thaps6961.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0243

Most Highly Correlated Transcripts

8762

SNF2_N
0.9011

3436

SLAC1
0.893

262616

(MYB22)
0.892

270222

0.8873

4047

hypothetical protein
0.8873

24852

hypothetical protein
0.883

23332

COG0790
0.8824

10619

hypothetical protein
0.879

23096

hypothetical protein
0.8771

1079

hypothetical protein
0.8736

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NIF superfamily NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... - 72.3113 2.02E-14 384 - 541 superfamily 266644
NIF superfamily NLI interacting factor-like phosphatase; This family contains a number of NLI interacting factor... - 72.3113 2.02E-14 384 - 541 superfamily 266644

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42478 PHATRDRAFT_42478 234504 287326 Not available Not available AT5G58003.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005622 GO:0000158 GO:0004721 GO:0004723 GO:0004724 GO:0005963 GO:0008420 GO:0008597 GO:0015071 GO:0017018 GO:0017020 GO:0017023 GO:0030357 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0000158

NA

Details: 
NA
GO Category: 
NA

GO:0004721

phosphoprotein phosphatase activity

Details: 
Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
GO Category: 
MF

GO:0004723

calcium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.
GO Category: 
MF

GO:0004724

magnesium-dependent protein serine/threonine phosphatase activity

Details: 
Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of magnesium.
GO Category: 
MF

GO:0005963

magnesium-dependent protein serine/threonine phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.
GO Category: 
CC

GO:0008420

CTD phosphatase activity

Details: 
Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate.
GO Category: 
MF

GO:0008597

calcium-dependent protein serine/threonine phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.
GO Category: 
MF

GO:0015071

NA

Details: 
NA
GO Category: 
NA

GO:0017018

myosin phosphatase activity

Details: 
Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.
GO Category: 
MF

GO:0017020

myosin phosphatase regulator activity

Details: 
Modulation of the activity of the enzyme myosin phosphatase.
GO Category: 
MF

GO:0017023

myosin phosphatase complex

Details: 
An enzyme complex that catalyzes the removal of the phosphate group from phosphomyosin.
GO Category: 
CC

GO:0030357

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments