6996 MhpD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6996 chr_7 MhpD 992769 993518 + MhpD

Synonyms

NCBI ID Ensembl Genomes exon ID
7447050 Thaps6996.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0123

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9187

10898

hypothetical protein
0.8959

37934

GRX_PICOT_like
0.8847

42380

RRM_ist3_like
0.8813

6434

hypothetical protein
0.8718

32610

hypothetical protein
0.8708

23537

hypothetical protein
0.8682

269624

TIM_phosphate_binding superfamily
0.8677

24373

hypothetical protein
0.8676

262860

NRDE superfamily
0.8589

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... cl11421 199.074 2.85E-63 36 - 241 specific 250705
FAA_hydrolase superfamily Fumarylacetoacetate (FAA) hydrolase family; This family consists of fumarylacetoacetate (FAA)... - 199.074 2.85E-63 36 - 241 superfamily 264359
MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [... - 242.233 2.78E-79 32 - 229 multi-dom 223257

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23168 PHATRDRAFT_23168 222483 299275 70982 Cre12.g549450.t1.2 AT4G15940.1 313206

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 GO:0000247 GO:0008416 GO:0016863 GO:0018842 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0000247

C-8 sterol isomerase activity

Details: 
Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols.
GO Category: 
MF

GO:0008416

delta5-delta2,4-dienoyl-CoA isomerase activity

Details: 
Catalysis of the isomerization of 3,5-dienoyl-CoA to 2,4-dienoyl-CoA.
GO Category: 
MF

GO:0016863

intramolecular oxidoreductase activity, transposing C=C bonds

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.
GO Category: 
MF

GO:0018842

3-carboxymuconate cycloisomerase type II activity

Details: 
Catalysis of the reaction: 3-sulfomuconate = 4-sulfolactone.
GO Category: 
MF

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