7963 DENN superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7963 chr_9 DENN superfamily 377363 382214 - DENN superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443517 Thaps7963.2, Thaps7963.3, Thaps7963.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0193

Most Highly Correlated Transcripts

12836

EEP superfamily
0.9013

1216

hypothetical protein
0.8947

263653

P-ATPase-V
0.8933

22799

O-FucT_like
0.8933

263610

COG3899
0.8924

24035

Peptidase_C19 superfamily
0.8849

24063

COG3899
0.8831

25073

hypothetical protein
0.8776

5780

hypothetical protein
0.876

24529

hypothetical protein
0.8758

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 127.294 9.99E-33 549 - 702 superfamily 264408
uDENN uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... cl04085 75.366 5.14E-16 432 - 495 specific 251967
uDENN superfamily uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... - 75.366 5.14E-16 432 - 495 superfamily 262011
dDENN Domain always found downstream of DENN domain, found in a variety of signalling proteins; The dDENN... cl04084 60.7666 6.51E-11 808 - 883 specific 129037
dDENN superfamily dDENN domain; This region is always found associated with pfam02141. It is predicted to form a... - 60.7666 6.51E-11 808 - 883 superfamily 262010

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 204305 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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