8134 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8134 chr_9 hypothetical protein 855078 857716 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7450965 Thaps8134.2, Thaps8134.3, Thaps8134.4, Thaps8134.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0114

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0025
 0.38

Most Highly Correlated Transcripts

23212

SET
0.8466

bd686

(bd686) Glyco_transf_22 superfamily
0.8388

24053

hypothetical protein
0.8342

20828

hypothetical protein
0.8304

9650

hypothetical protein
0.8254

22683

hypothetical protein
0.8238

34590

nt_trans superfamily
0.8151

38060

DRMBL
0.808

10894

hypothetical protein
0.8008

12836

EEP superfamily
0.8008

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 GO:0003677 GO:0006355 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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