8145 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8145 chr_9 COG3899 886054 890558 + COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7448113 Thaps8145.4, Thaps8145.2, Thaps8145.3, Thaps8145.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425

Most Highly Correlated Transcripts

23895

hypothetical protein
0.8564

24492

Lipase_3
0.8496

9575

hypothetical protein
0.8492

269496

(Tp_TAZ3_PHD1) KAT11 superfamily
0.8475

24796

hypothetical protein
0.8464

23334

hypothetical protein
0.8428

20935

hypothetical protein
0.8419

20675

WD40 superfamily
0.8418

24489

TPR_12
0.8415

25023

Sec15 superfamily
0.8405

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 72.1101 3.02E-14 394 - 583 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 72.1101 3.02E-14 394 - 583 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 257.712 1.60E-71 395 - 1164 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments