8546 60KD_IMP superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8546 chr_10 60KD_IMP superfamily 877798 879689 - 60KD_IMP superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450756 Thaps8546.2, Thaps8546.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0132
 0.41

Most Highly Correlated Transcripts

37539

cpn10
0.908

bd258

(bd258) HU
0.8832

5293

PRK00772
0.878

268519

hypothetical protein
0.8758

41178

hisG
0.8728

9943

hypothetical protein
0.8677

bd719

(bd719) NA
0.8673

269961

Ribosomal_L7Ae superfamily
0.8627

bd1863

(bd1863) NA
0.855

33008

PLN02338
0.8515

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
60KD_IMP superfamily 60Kd inner membrane protein; 60Kd inner membrane protein. - 90.6967 6.86E-21 168 - 397 superfamily 260457

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42866 PHATRDRAFT_42866 239214 321713 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 GO:0051205 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0051205

protein insertion into membrane

Details: 
The process that results in the incorporation of a protein into a biological membrane.
GO Category: 
BP

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