8672 NADB_Rossmann superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8672	chr_11a	NADB_Rossmann superfamily	181718	182482	+	NADB_Rossmann superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444536	Thaps8672.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0006

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0261	0.35	400 120

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9171	264157 CBS_pair superfamily 0.8835	42577 (PGK3) Phosphoglycerate_kinase 0.8627	22074 hypothetical protein 0.8626	20892 hypothetical protein 0.8521	21690 hypothetical protein 0.8517
32029 Sterol_MT_C superfamily 0.8336	34211 Cytochrom_C superfamily 0.8305	34514 PLN02539 0.8268	1038 SPRYD7 0.8262

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	81.5184	5.71E-19	6 - 250	superfamily	263925

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	307066	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments