8813 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8813	chr_11a	ANK	596896	604482	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444470	Thaps8813.5, Thaps8813.2, Thaps8813.7, Thaps8813.1, Thaps8813.9, Thaps8813.3, Thaps8813.8, Thaps8813.6, Thaps8813.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Most Highly Correlated Transcripts

8915 hypothetical protein 0.8973	11265 hypothetical protein 0.8924	24492 Lipase_3 0.8781	24685 Glyco_tranf_GTA_type superfamily 0.8763	24489 TPR_12 0.8721	24029 hypothetical protein 0.8697
25435 hypothetical protein 0.8688	1172 hypothetical protein 0.8618	22864 (SDH) GcvT 0.8585	bd1839 (bd1839) NA 0.858

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	66.253	3.71E-12	1494 - 1656	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	66.253	3.71E-12	1494 - 1656	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	241857	23444	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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