8952 PTZ00295
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8952 chr_12 PTZ00295 122183 124337 + PTZ00295

Synonyms

NCBI ID Ensembl Genomes exon ID
7449364 Thaps8952.4, Thaps8952.2, Thaps8952.1, Thaps8952.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0493

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0167
 0.37

Most Highly Correlated Transcripts

bd1844

(bd1844) NA
0.9162

24521

(GFA_1) PTZ00295
0.8679

21663

hypothetical protein
0.8499

42123

PTZ00295
0.8227

22002

hypothetical protein
0.8173

36889

S_TKc
0.8064

22003

hypothetical protein
0.7885

262151

Chitin_synth_2
0.7873

21666

hypothetical protein
0.7867

21661

hypothetical protein
0.782

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of... cl00319 291.273 5.20E-94 63 - 298 specific 238366
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 291.273 5.20E-94 63 - 298 superfamily 260351
SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 133.927 1.49E-36 523 - 640 specific 240142
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 120.68 4.47E-32 357 - 484 superfamily 260399
SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 120.68 4.47E-32 357 - 484 specific 240141
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 120.68 4.47E-32 357 - 484 superfamily 260399
PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional - 679.436 0 62 - 646 multi-dom 240349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14994 PHATRDRAFT_14994 231027 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0005529 GO:0005975 GO:0004360 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0005529

NA

Details: 
NA
GO Category: 
NA

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0004360

glutamine-fructose-6-phosphate transaminase (isomerizing) activity

Details: 
Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.
GO Category: 
MF

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