9405 Cytochrome_b_N superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9405 chr_13 Cytochrome_b_N superfamily 348835 350243 + Cytochrome_b_N superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445739 Thaps9405.1, Thaps9405.3, Thaps9405.2, Thaps9405.4, Thaps9405.5

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0007

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0261
 0.35

Most Highly Correlated Transcripts

26991

GRX_GRXh_1_2_like
0.9153

37934

GRX_PICOT_like
0.9114

18091

Peptidase_S9 superfamily
0.9007

36037

Trypsin_2
0.8986

261882

Thioredoxin_like superfamily
0.8911

38608

SDR_a5
0.8901

22171

hypothetical protein
0.8891

16075

tpt
0.8888

9776

hypothetical protein
0.8821

23024

hypothetical protein
0.8815

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cytochrome_b_N superfamily Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit... - 81.196 4.43E-19 51 - 219 superfamily 260663

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 234408 249542 421576 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016021 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

Add comment

Log in to post comments