9852 SPC22 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
9852 chr_14 SPC22 superfamily 537827 538735 - SPC22 superfamily
NCBI ID Ensembl Genomes exon ID
7451247 Thaps9852.1, Thaps9852.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0456
Normalized Mean Residue
Thaps_bicluster_0182
0.48
DHQS
0.8337
(bd1844) NA
0.8274
PRK14293
0.8219
0.8193
PLN02321
0.8129
hypothetical protein
0.8089
TRX_reduct
0.8073
ELO
0.8064
Chorismate_synthase
0.8053
TIM_phosphate_binding superfamily
0.8051
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPC22 superfamily Signal peptidase subunit; Translocation of polypeptide chains across the endoplasmic reticulum... - 135.147 5.47E-39 76 - 245 superfamily 194922
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_18533 PHATR_18533 195672 260607 218228 Cre14.g620400.t1.2 AT3G05230.1 444736
KEGG description KEGG Pathway
Protein export map03060
GO:0005787 GO:0006465 GO:0009003 GO:0016021 GO:0008233 GO:0008234 -

signal peptidase complex

Details: 
A protein complex that is located in the endoplasmic reticulum membrane and cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space.
GO Category: 
CC

signal peptide processing

Details: 
The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF
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