bd1290 (bd1290) atpHThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1290	bd_26x41	(bd1290) atpH	51271	51519	-	atpH

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0065

Most Highly Correlated Transcripts

ThpsCp013 (atpH) ATP synthase CF0 C subunit 1	bd1378 (bd1378) atpI 0.9968	ThpsCp012 (atpI) ATP synthase CF0 A subunit 0.9968	bd598 (bd598) atpG 0.9925	ThpsCp014 (atpG) ATP synthase CF0 B' subunit 0.9925	bd1318 (bd1318) atpF 0.9899
ThpsCp015 (atpF) ATP synthase CF0 B subunit 0.9899	bd1023 (bd1023) atpD 0.9841	ThpsCp016 (atpD) ATP synthase CF1 delta subunit 0.9841	ThpsCp009 (rbcL) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit 0.9787

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
atpH		ATP synthase CF0 C subunit	cl00466	108.647	3.60E-32	1 - 80	specific	177001
ATP-synt_C superfamily		ATP synthase subunit C; ATP synthase subunit C.	-	108.647	3.60E-32	1 - 80	superfamily	260442

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	210751	Not available	Not available	ATCG00140.1	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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