bd1447 (bd1447) rps6Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1447	bd_27x41	(bd1447) rps6	3060	3371	+	rps6

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0002

Most Highly Correlated Transcripts

ThpsCp127 (rps6) ribosomal protein S6 1	33682 (Tp_sigma70.3a) Sig70-cyanoRpoD 0.8675	bd977 (bd977) rps14 0.8086	ThpsCp045 (rps14) ribosomal protein S14 0.8086	25031 hypothetical protein 0.8075	262381 LSm6 0.8062
1798 hypothetical protein 0.8045	ThpsCp091 (thiS) thiamine biosynthesis protein 0.7825	21879 hypothetical protein 0.78	7239 hypothetical protein 0.7745

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rps6		ribosomal protein S6; Validated	cl00414	125.5	2.85E-38	1 - 96	specific	177046
Ribosomal_S6 superfamily		Ribosomal protein S6; Ribosomal protein S6.	-	125.5	2.85E-38	1 - 96	superfamily	260412

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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