1075 mTERF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1075 chr_1 mTERF superfamily 586830 594138 + mTERF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449755 Thaps1075.5, Thaps1075.2, Thaps1075.1, Thaps1075.3, Thaps1075.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0458

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0027
 0.38

Most Highly Correlated Transcripts

bd1039

(bd1039) psbV
0.9312

bd2088

(bd2088) rbcL
0.9268

bd1192

(bd1192) Acyl_ACP_Desat
0.9143

bd1863

(bd1863) NA
0.912

bd1378

(bd1378) atpI
0.9079

bd1342

(bd1342) psaL
0.9077

bd1290

(bd1290) atpH
0.9066

bd1037

(bd1037) Ycf66_N
0.9004

bd467

(bd467) Cytochrome_b_N
0.8937

bd794

(bd794) NA
0.8935

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
mTERF superfamily mTERF; This family contains one sequence of known function Human mitochondrial transcription... - 69.4011 2.25E-12 989 - 1176 superfamily 268118
mTERF superfamily mTERF; This family contains one sequence of known function Human mitochondrial transcription... - 69.4011 2.25E-12 989 - 1176 superfamily 268118

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44136 PHATR_44136 203891 130407 241148 Not available AT2G21710.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments