21846 GINS_A_Sld5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21846 chr_3 GINS_A_Sld5 1422578 1424224 - GINS_A_Sld5

Synonyms

NCBI ID Ensembl Genomes exon ID
7451284 Thaps21846.2, Thaps21846.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0159

Most Highly Correlated Transcripts

16114

PLN02350
0.8102

14875

GT_GPT_euk
0.8081

37118

FeThRed_B
0.8012

10526

Glyco_tranf_GTA_type superfamily
0.7838

7304

hypothetical protein
0.7836

22673

NA
0.7745

36502

IF4E
0.7712

269624

TIM_phosphate_binding superfamily
0.7681

7004

hypothetical protein
0.7681

37574

PTZ00356
0.7643

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GINS_A_Sld5 Alpha-helical domain of GINS complex protein Sld5; Sld5 is a component of GINS tetrameric protein... cl17012 106.541 2.54E-28 98 - 229 specific 212549
GINS_A superfamily Alpha-helical domain of GINS complex proteins; Sld5, Psf1, Psf2 and Psf3; The GINS complex is... - 106.541 2.54E-28 98 - 229 superfamily 266497

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44146 PHATR_44146 Not available 288136 Not available Not available AT5G49010.1 355017

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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