22208 COG0075
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22208 chr_4 COG0075 861900 863612 + COG0075

Synonyms

NCBI ID Ensembl Genomes exon ID
7453335 Thaps22208.3, Thaps22208.2, Thaps22208.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

31169

PRX_BCP
0.9259

14147

PRK08198
0.9182

38608

SDR_a5
0.8905

261608

PLN02585
0.8877

9903

(Tp_bZIP24b) regulator [Rayko]
0.8864

26991

GRX_GRXh_1_2_like
0.8833

262553

Voltage_gated_ClC
0.8817

22396

hypothetical protein
0.8801

269147

NAD_binding_8 superfamily
0.8761

261882

Thioredoxin_like superfamily
0.8743

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and... cl18945 218.264 1.02E-65 99 - 472 specific 223153
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 218.264 1.02E-65 99 - 472 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49601 PHATRDRAFT_49601 211817 318813 465919 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008453 -

GO:0008453

alanine-glyoxylate transaminase activity

Details: 
Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine.
GO Category: 
MF

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