24777 WGG superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24777	chr_14	WGG superfamily	155470	156556	+	WGG superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451638	Thaps24777.1, Thaps24777.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0056

Most Highly Correlated Transcripts

270222 0.9065	40200 TRX_reduct 0.8826	268443 SAICAR_synt_Sc 0.8733	267979 HCO3_cotransp superfamily 0.8583	bd74 (bd74) T6A_YgjD 0.8547	269624 TIM_phosphate_binding superfamily 0.8536
37118 FeThRed_B 0.8465	20712 hypothetical protein 0.8391	4543 hypothetical protein 0.8391	16114 PLN02350 0.8348

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WGG superfamily		Pre-rRNA-processing protein TSR2; This entry represents the central conserved section of a family...	-	87.6501	2.88E-22	16 - 99	superfamily	255871

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_33186	PHATR_33186	197416	28181	Not available	Not available	Not available	505165

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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