25697 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25697	chr_22	ANK	218757	222855	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442796	Thaps25697.1, Thaps25697.5, Thaps25697.6, Thaps25697.3, Thaps25697.4, Thaps25697.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0330

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0100	0.39	4.5 0.21

Most Highly Correlated Transcripts

22355 hypothetical protein 0.8725	3196 hypothetical protein 0.8557	36301 HMG-box 0.8466	25223 SNF2_N 0.8415	22277 RdRP 0.8318	25417 hypothetical protein 0.8298
24434 hypothetical protein 0.8298	10533 hypothetical protein 0.828	9008 hypothetical protein 0.8279	21307 hypothetical protein 0.821

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	75.1126	1.35E-15	870 - 984	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	75.1126	1.35E-15	870 - 984	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_39760	PHATRDRAFT_39760	189735	141005	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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