25854 Peptidase_C48 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25854 chr_23 Peptidase_C48 superfamily 271639 275887 + Peptidase_C48 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0118

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0008
 0.44

Most Highly Correlated Transcripts

264762

0.8615

bd1835

(bd1835) NA
0.8582

bd692

(bd692) NA
0.8467

11664

DUF3510
0.8449

8885

DUF3510
0.8364

25688

Hira superfamily
0.8323

bd1237

(bd1237) 3a01204
0.8283

25852

Peptidase_A22B superfamily
0.8223

12084

hypothetical protein
0.8206

8813

ANK
0.8177

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C48 superfamily Ulp1 protease family, C-terminal catalytic domain; This domain contains the catalytic triad Cys-His... - 72.2488 4.41E-13 876 - 1118 superfamily 266836

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49765 PHATRDRAFT_49765 245578 257073 Not available Not available AT1G09730.2 298003

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008234 GO:0004197 GO:0016946 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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