261499 MttA_Hcf106 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261499 chr_2 MttA_Hcf106 superfamily 1829305 1829882 - MttA_Hcf106 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452308 Thaps261499.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0214
 0.34

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.9295

38306

Chloroa_b-bind
0.9273

268324

60KD_IMP
0.923

36235

p450 superfamily
0.9214

263658

GUN4
0.9183

261608

PLN02585
0.915

38608

SDR_a5
0.9131

26991

GRX_GRXh_1_2_like
0.9129

24876

hypothetical protein
0.911

5314

hypothetical protein
0.9101

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MttA_Hcf106 superfamily mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation... - 59.4937 3.16E-12 116 - 192 superfamily 260623

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52200 PHATRDRAFT_52200 273292 305642 371404 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Protein export map03060

GO Terms

GO:0008565 GO:0015031 GO:0009306 GO:0015450 GO:0016020 -

GO:0008565

protein transporter activity

Details: 
Enables the directed movement of proteins into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0009306

protein secretion

Details: 
The controlled release of proteins from a cell.
GO Category: 
BP

GO:0015450

P-P-bond-hydrolysis-driven protein transmembrane transporter activity

Details: 
Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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