26366 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26366 chr_10 Mito_carr 794359 795712 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7446892 Thaps26366.2, Thaps26366.1, Thaps26366.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0328

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0192
 0.36

Most Highly Correlated Transcripts

8521

PseudoU_synth superfamily
0.9155

5130

COG0790
0.8395

28239

PLN02272
0.8357

3223

hypothetical protein
0.8324

22345

(PYK2) PLN02461
0.8177

261885

RRM1_RBM34
0.8075

bd524

(bd524) NA
0.8033

20731

Mito_carr
0.8014

bd621

(bd621) NA
0.7992

36007

Aldolase_II superfamily
0.7949

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.0295 4.48E-11 10 - 101 superfamily 249634
PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional - 80.5826 8.27E-18 4 - 294 multi-dom 240302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23908 PHATRDRAFT_23908 180618 248412 426989 Cre16.g672650.t1.2 AT5G19760.1 548251

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 GO:0005215 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

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