28330 PurH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28330 chr_5 PurH 1298061 1300404 - PurH

Synonyms

NCBI ID Ensembl Genomes exon ID
7453186 Thaps28330.4, Thaps28330.1, Thaps28330.3, Thaps28330.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0162
 0.37

Most Highly Correlated Transcripts

26492

PRK05385
0.8923

3007

hypothetical protein
0.8804

263424

PLN02551
0.8769

263630

(MTS) tRNA_bind_EMAP-II_like
0.8678

269018

hypothetical protein
0.8665

264164

Porin3_Tom40
0.8497

39845

(DNA_TopoIV) PRK05560
0.8451

11220

eIF2A
0.8444

37071

TIM_phosphate_binding superfamily
0.8429

269966

(VTS1) PTZ00419
0.8389

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine... cl00245 293.351 1.76E-95 20 - 205 specific 238709
MGS-like superfamily MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which... - 293.351 1.76E-95 20 - 205 superfamily 260295
PRK07106 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; Provisional cl03362 615.905 0 222 - 616 specific 180841
AICARFT_IMPCHas superfamily AICARFT/IMPCHase bienzyme; This is a family of bifunctional enzymes catalyzing the last two steps... - 615.905 0 222 - 616 superfamily 261705
PurH AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide... - 633.134 0 17 - 616 multi-dom 223216

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23429 PHATRDRAFT_23429 229076 326643 424199 Cre12.g537581.t1.1 AT2G35040.2 546417

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003937 GO:0004643 GO:0006164 -

GO:0003937

IMP cyclohydrolase activity

Details: 
Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.
GO Category: 
MF

GO:0004643

phosphoribosylaminoimidazolecarboxamide formyltransferase activity

Details: 
Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide.
GO Category: 
MF

GO:0006164

purine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO Category: 
BP

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