2950 (UroS) HemD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2950 chr_2 (UroS) HemD 2312675 2313667 + HemD

Synonyms

NCBI ID Ensembl Genomes exon ID
7452914 Thaps2950.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0231
 0.32

Most Highly Correlated Transcripts

9513

hypothetical protein
0.9205

bd1765

(bd1765) NA
0.9041

268773

Gst
0.8955

5135

Rubis-subs-bind
0.8953

8333

hypothetical protein
0.8944

8701

hypothetical protein
0.8893

bd624

(bd624) Glyco_transf_34 superfamily
0.8867

36235

p450 superfamily
0.8854

35816

(GAPD2) PRK08955
0.8847

bd1161

(bd1161) NA
0.8829

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear... cl03649 148.609 1.98E-42 67 - 313 specific 119440
HemD superfamily Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear... - 148.609 1.98E-42 67 - 313 superfamily 261820

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44610 PHATRDRAFT_44610 201897 203132 54852 Cre09.g409100.t1.2 AT2G26540.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004852 GO:0006779 GO:0006783 -

GO:0004852

uroporphyrinogen-III synthase activity

Details: 
Catalysis of the reaction: hydroxymethylbilane = H(2)O + uroporphyrinogen III.
GO Category: 
MF

GO:0006779

porphyrin-containing compound biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO Category: 
BP

GO:0006783

heme biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.
GO Category: 
BP

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