3058 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3058 chr_2 WD40 superfamily 2647425 2648728 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452142 Thaps3058.3, Thaps3058.4, Thaps3058.1, Thaps3058.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0430

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0145
 0.29

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.9379

40200

TRX_reduct
0.9361

268443

SAICAR_synt_Sc
0.9025

36007

Aldolase_II superfamily
0.8932

13308

PLN02948
0.8846

13393

PLN02321
0.8838

35136

NA
0.8781

19158

GRX_PICOT_like
0.8689

264556

FBPase
0.8681

35933

Paf67 superfamily
0.8669

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 77.7604 8.84E-17 62 - 307 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 67.8063 6.93E-13 14 - 307 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32949 PHATRDRAFT_32949 189400 193637 74365 Cre04.g215750.t1.2 AT3G19590.1 345772

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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