31424 (AAT2) Aminotran_1_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31424 chr_1 (AAT2) Aminotran_1_2 1358088 1359702 + Aminotran_1_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7451457 Thaps31424.4, Thaps31424.3, Thaps31424.1, Thaps31424.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0049

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

1770

hypothetical protein
0.8977

32252

(RPI2) RPI_A
0.8895

4524

DHQS
0.8886

41005

odpB
0.8874

13393

PLN02321
0.8853

261126

DadA
0.8834

262977

NA
0.8834

38964

Chorismate_synthase
0.8824

261823

FIG superfamily
0.8782

261636

0.8759

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 145.947 1.66E-39 87 - 435 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 145.947 1.66E-39 87 - 435 superfamily 267298
Aminotran_1_2 Aminotransferase class I and II; Aminotransferase class I and II. - 252.227 2.49E-79 69 - 433 multi-dom 249636

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23059 PHATRDRAFT_23059 170472 325921 467854 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006520 GO:0008483 GO:0009058 GO:0016769 GO:0004069 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0004069

L-aspartate:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.
GO Category: 
MF

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