32273 PCI superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32273 chr_2 PCI superfamily 532584 533673 + PCI superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446474 Thaps32273.3, Thaps32273.1, Thaps32273.4, Thaps32273.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0096
 0.39

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9671

269028

Methyltrans_RNA superfamily
0.8794

9040

ELP3
0.8765

269925

AAA_12 superfamily
0.8721

4517

hypothetical protein
0.8715

262965

0.8691

269034

hypothetical protein
0.866

33775

MetAP1
0.8591

264345

SpoU
0.8559

34176

AdoMet_MTases superfamily
0.8556

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PCI superfamily PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). - 173.445 9.86E-51 26 - 274 superfamily 261183

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13237 PHATR_13237 199896 226451 463862 Cre02.g110400.t1.2 AT2G19560.1 260508

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments