33574 PP-binding superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33574 chr_4 PP-binding superfamily 250516 250770 + PP-binding superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442058 Thaps33574.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0181

Most Highly Correlated Transcripts

39497

Sar1
0.9054

25040

NA
0.9039

26706

(PSA7) proteasome_alpha_type_7
0.8925

269624

TIM_phosphate_binding superfamily
0.8901

23960

hypothetical protein
0.8893

37934

GRX_PICOT_like
0.8885

22722

DUF2012 superfamily
0.8876

37118

FeThRed_B
0.8861

35136

NA
0.8845

268343

NA
0.8764

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PP-binding superfamily Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached... - 95.1502 3.69E-26 1 - 84 superfamily 263928

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31440 PHATRDRAFT_31440 173760 306809 441229 Cre16.g673109.t1.1 AT1G65290.1 286616

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0000036 GO:0006633 GO:0031177 GO:0048037 -

GO:0000036

ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process

Details: 
Interacting selectively and non-covalently with the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP) as part of the process of fatty acid biosynthesis.
GO Category: 
MF

GO:0006633

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

GO:0031177

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

GO:0048037

cofactor binding

Details: 
Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
GO Category: 
MF

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