33973 Patatin_and_cPLA2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33973 chr_4 Patatin_and_cPLA2 superfamily 1180340 1183254 - Patatin_and_cPLA2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447970 Thaps33973.1, Thaps33973.3, Thaps33973.2, Thaps33973.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0164

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0006
 0.41

Most Highly Correlated Transcripts

15977

(DGK) DAGK_acc
0.8457

9166

hypothetical protein
0.842

6207

hypothetical protein
0.8342

20753

PDI_a_family
0.8339

21469

hypothetical protein
0.8328

6233

DUF4239
0.8306

23311

Vps53_N superfamily
0.83

36372

S_TKc
0.8296

261045

PI3Kc_like superfamily
0.8284

25288

Sec6 superfamily
0.8265

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 435.927 4.01E-145 317 - 725 superfamily 264349
DUF3336 superfamily Domain of unknown function (DUF3336); This family of proteins are functionally uncharacterized.... - 92.7273 1.29E-21 248 - 381 superfamily 256643
DUF3336 superfamily Domain of unknown function (DUF3336); This family of proteins are functionally uncharacterized.... - 92.7273 1.29E-21 248 - 381 superfamily 256643

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45518 PHATRDRAFT_45518 165718 259815 104628 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0045735 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0045735

nutrient reservoir activity

Details: 
Functions in the storage of nutritious substrates.
GO Category: 
MF

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