35266 (DYN1) DLP_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35266 chr_7 (DYN1) DLP_1 355426 358106 - DLP_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448948 Thaps35266.1, Thaps35266.4, Thaps35266.3, Thaps35266.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0166

Most Highly Correlated Transcripts

24334

EXS superfamily
0.8975

12836

EEP superfamily
0.8768

261045

PI3Kc_like superfamily
0.8763

269663

(COP4) SEC21
0.8735

2328

hypothetical protein
0.8725

39741

(APM3) AP-3_Mu3_Cterm
0.8718

25678

hypothetical protein
0.8704

24729

hypothetical protein
0.8691

6236

COG4976
0.868

20865

DUF1162 superfamily
0.8661

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DLP_1 Dynamin_like protein family includes dynamins and Mx proteins; The dynamin family of large... cl17170 377.356 7.87E-126 24 - 311 specific 206738
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 377.356 7.87E-126 24 - 311 superfamily 266525
Dynamin_M superfamily Dynamin central region; This region lies between the GTPase domain, see pfam00350, and the... - 304.053 1.37E-97 232 - 502 superfamily 250308
Dynamin_M superfamily Dynamin central region; This region lies between the GTPase domain, see pfam00350, and the... - 304.053 1.37E-97 232 - 502 superfamily 250308
GED Dynamin GTPase effector domain; Dynamin GTPase effector domain. cl02558 125.297 4.86E-34 590 - 677 specific 251160
GED superfamily Dynamin GTPase effector domain; Dynamin GTPase effector domain. - 125.297 4.86E-34 590 - 677 superfamily 261341
COG0699 Predicted GTPases (dynamin-related) [General function prediction only] - 185.879 7.00E-51 90 - 674 multi-dom 223771

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54751 PHATRDRAFT_54751 199636 322354 43878 Cre17.g724150.t1.1 AT2G14120.1 560655

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

GO:0005525 GO:0003924 GO:0008549 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0008549

NA

Details: 
NA
GO Category: 
NA

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