36045 UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36045 chr_8 UBCc 946713 947216 + UBCc
NCBI ID Ensembl Genomes exon ID
7452867 Thaps36045.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0226
Normalized Mean Residue
Thaps_bicluster_0233
0.34
PLN02274
0.9138
(bd1945) NA
0.9128
hypothetical protein
0.91
Methyltransf_4 superfamily
0.9005
hypothetical protein
0.8982
Nop52 superfamily
0.8915
PLN02347
0.8867
COG2319
0.8812
DHDPS
0.8803
PRK05192
0.8795
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 114.607 1.64E-32 27 - 140 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 114.607 1.64E-32 27 - 140 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10724 PHATRDRAFT_10724 273521 206364 452424 Cre02.g141450.t1.2 AT5G42990.1 Not available
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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