37083 PTZ00037
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37083 chr_13 PTZ00037 931893 933525 - PTZ00037

Synonyms

NCBI ID Ensembl Genomes exon ID
7450520 Thaps37083.1, Thaps37083.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0199
 0.24

Most Highly Correlated Transcripts

35164

acolac_lg
0.915

261109

NBD_sugar-kinase_HSP70_actin superfamily
0.9052

bd1945

(bd1945) NA
0.8979

22240

eRF1
0.8875

27873

PLN02274
0.8843

595

S1_IF1A
0.8813

bd1876

(bd1876) NatB_MDM20 superfamily
0.8731

268238

PRK05192
0.8667

35933

Paf67 superfamily
0.8653

24016

Ebp2 superfamily
0.8593

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ_C superfamily C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40... - 147.572 2.35E-42 140 - 348 superfamily 199909
DnaJ_C superfamily C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40... - 147.572 2.35E-42 140 - 348 superfamily 199909
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 85.2897 6.81E-21 40 - 88 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 85.2897 6.81E-21 40 - 88 superfamily 261333
PTZ00037 DnaJ_C chaperone protein; Provisional - 337.178 1.15E-111 1 - 418 multi-dom 240236

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42151 PHATRDRAFT_42151 149278 318547 456932 Cre17.g701500.t1.2 AT5G22060.1 345922

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0006457 GO:0031072 GO:0051082 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0031072

heat shock protein binding

Details: 
Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO Category: 
MF

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

Add comment

Log in to post comments