38285 (PMSR1) MsrA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38285 chr_19a_19 (PMSR1) MsrA 112812 114126 - MsrA

Synonyms

NCBI ID Ensembl Genomes exon ID
7449880 Thaps38285.2, Thaps38285.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0130
 0.40

Most Highly Correlated Transcripts

30701

PRK05279
0.9377

37934

GRX_PICOT_like
0.9266

270222

0.9253

18462

EMP24_GP25L
0.9174

262977

NA
0.9088

9772

TOPEUc
0.9081

269110

hypothetical protein
0.9077

269624

TIM_phosphate_binding superfamily
0.9071

5105

hypothetical protein
0.9036

31003

gpsA
0.9021

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MsrA Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover,... cl00366 202.839 3.48E-63 247 - 392 specific 223303
PMSR superfamily Peptide methionine sulfoxide reductase; This enzyme repairs damaged proteins. Methionine sulfoxide... - 202.839 3.48E-63 247 - 392 superfamily 260385

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14769 PHATRDRAFT_14769 143092 216901 45796 Cre01.g012150.t1.2 AT4G25130.1 490563

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006464 GO:0008113 -

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0008113

peptide-methionine (S)-S-oxide reductase activity

Details: 
Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.
GO Category: 
MF

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