42740 deoxycytidylate_deaminase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42740 chr_18 deoxycytidylate_deaminase 303679 304527 - deoxycytidylate_deaminase

Synonyms

NCBI ID Ensembl Genomes exon ID
7442961 Thaps42740.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.9274

12899

AAA
0.9059

bd1387

(bd1387) psbE
0.8927

bd1350

(bd1350) psaF
0.8915

bd1820

(bd1820) Fasciclin
0.8825

bd974

(bd974) DUF751
0.8799

bd1304

(bd1304) Ycf4
0.8775

bd1313

(bd1313) psbH
0.8773

bd1645

(bd1645) tpt
0.8765

bd1765

(bd1765) NA
0.8735

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
deoxycytidylate_deaminase Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to... cl00269 168.992 6.35E-53 72 - 202 specific 238613
cytidine_deaminase-like superfamily Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases... - 168.992 6.35E-53 72 - 202 superfamily 260314

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261883 PHATRDRAFT_9348 PHATRDRAFT_9348 185726 133427 64838 Cre19.g750897.t1.1 AT3G48540.1 480606

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008270 GO:0016787 GO:0004132 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0004132

dCMP deaminase activity

Details: 
Catalysis of the reaction: dCMP + H2O = dUMP + NH3.
GO Category: 
MF

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