7546 COG1505
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7546 chr_8 COG1505 505533 508166 + COG1505

Synonyms

NCBI ID Ensembl Genomes exon ID
7450157 Thaps7546.3, Thaps7546.2, Thaps7546.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0154

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0177
 0.33

Most Highly Correlated Transcripts

269937

M1_APN_2
0.9024

22096

SOUL
0.8974

1082

hypothetical protein
0.8944

1553

PKc_like superfamily
0.8933

270017

2OG-FeII_Oxy_3 superfamily
0.8932

5319

DPPIV_N
0.889

40868

EMP70 superfamily
0.8826

1820

SET
0.8795

7188

PKc_like superfamily
0.8788

5246

hypothetical protein
0.8746

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_S9 superfamily Prolyl oligopeptidase family; Prolyl oligopeptidase family. - 107.689 3.11E-26 607 - 817 superfamily 267497
COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] - 539.288 0 75 - 817 multi-dom 224422

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46548 PHATRDRAFT_46548 206739 30400 450620 Cre12.g541800.t1.2 AT1G20380.1 561955

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008236 GO:0004287 GO:0004252 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008236

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0004287

NA

Details: 
NA
GO Category: 
NA

GO:0004252

serine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

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