7975 eIF1_SUI1_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7975 chr_9 eIF1_SUI1_like superfamily 405178 407578 - eIF1_SUI1_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443524 Thaps7975.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0193

Most Highly Correlated Transcripts

8582

hypothetical protein
0.9022

4108

hypothetical protein
0.8951

13427

AarF
0.887

263610

COG3899
0.8789

261357

NAD_binding_8 superfamily
0.8736

4709

Adenylation_mRNA_capping
0.8718

6592

TroA-like superfamily
0.8681

1082

hypothetical protein
0.8622

24295

(RPN2) RPN2
0.8622

264023

RabGAP-TBC
0.8621

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eIF1_SUI1_like superfamily Eukaryotic initiation factor 1 and related proteins; Members of the eIF1/SUI1 (eukaryotic... - 67.9735 1.02E-13 684 - 762 superfamily 260281

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48547 PHATRDRAFT_48547 231566 200370 Not available Not available AT1G71350.1 481190

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003743 GO:0006413 -

GO:0003743

translation initiation factor activity

Details: 
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO Category: 
MF

GO:0006413

translational initiation

Details: 
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO Category: 
BP

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