8075 DENN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8075 chr_9 DENN 688579 690840 + DENN

Synonyms

NCBI ID Ensembl Genomes exon ID
7453057 Thaps8075.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0490

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0074
 0.37

Most Highly Correlated Transcripts

12836

EEP superfamily
0.7175

263610

COG3899
0.7021

10585

hypothetical protein
0.6987

2912

hypothetical protein
0.6984

22112

Vps54 superfamily
0.6969

10753

hypothetical protein
0.6897

2412

hypothetical protein
0.6895

33454

Ac_CoA_lig_AcsA
0.6893

25079

hypothetical protein
0.6861

22882

PUB
0.6851

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DENN DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... cl11519 170.436 5.85E-49 254 - 441 specific 251116
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 170.436 5.85E-49 254 - 441 superfamily 264408
uDENN Domain always found upstream of DENN domain, found in a variety of signalling proteins; The uDENN... cl04085 71.5968 6.71E-15 165 - 229 specific 214824
uDENN superfamily uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... - 71.5968 6.71E-15 165 - 229 superfamily 262011

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44845 PHATRDRAFT_44845 212289 317290 448142 Cre07.g352900.t1.1 AT1G49040.3 468694

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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