7044 Adaptin_NThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7044	chr_7	Adaptin_N	1120882	1123839	-	Adaptin_N

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444156	Thaps7044.1, Thaps7044.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0075

Most Highly Correlated Transcripts

bd446 (bd446) HrpA 0.9253	268650 (APB2) PTZ00429 0.8872	bd1949 (bd1949) NA 0.8819	bd392 (bd392) DEXDc 0.88	bd687 (bd687) NA 0.8684	262510 Alg6_Alg8 superfamily 0.8682
263994 Adaptin_N 0.8662	43150 PolyPPase_VTC4_like 0.8642	bd624 (bd624) Glyco_transf_34 superfamily 0.8525	22044 hypothetical protein 0.8499

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Adaptin_N		Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and...	-	218.631	1.12E-61	16 - 498	multi-dom	250737

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre06.g310000.t1.2	AT1G31730.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments