7672 Bestrophin superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7672	chr_8	Bestrophin superfamily	831722	832933	+	Bestrophin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452846	Thaps7672.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0205

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0263	0.34	0.55 17

Most Highly Correlated Transcripts

bd1150 (bd1150) PLN02433 0.9309	263422 (BIP3) PTZ00009 0.9063	261608 PLN02585 0.8829	1788 hypothetical protein 0.8785	35401 COG0523 0.8784	5293 PRK00772 0.8658
268474 PLN02657 0.8653	14192 PLN02449 0.8653	bd298 (bd298) ABM superfamily 0.8605	36235 p450 superfamily 0.8595

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Bestrophin superfamily		Bestrophin, RFP-TM, chloride channel; Bestrophin is a 68-kDa basolateral plasma membrane protein...	-	113.004	9.60E-29	73 - 352	superfamily	260991

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	252491	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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