1255 Nic96 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1255 chr_1 Nic96 superfamily 1054159 1057085 + Nic96 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451547 Thaps1255.2, Thaps1255.3, Thaps1255.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.9144

5694

hypothetical protein
0.9053

261056

(APB3) Adaptin_N
0.9003

261491

Melibiase superfamily
0.8945

13920

PAP_central
0.8897

264816

ABC_ATPase superfamily
0.8895

12810

KAP95
0.8893

262891

Nucleoporin2
0.8879

9148

hypothetical protein
0.8862

6874

hypothetical protein
0.8859

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nic96 superfamily Nup93/Nic96; Nup93/Nic96 is a component of the nuclear pore complex. It is required for the correct... - 103.536 4.57E-23 524 - 922 superfamily 252370

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47393 PHATRDRAFT_47393 243901 326953 Not available Not available Not available 302408

KEGG

KEGG description KEGG Pathway
RNA transport map03013

GO Terms

Not available -

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