262891 Nucleoporin2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262891 chr_6 Nucleoporin2 1102920 1108075 + Nucleoporin2

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

11434

hypothetical protein
0.8953

992

hypothetical protein
0.8913

40402

SrmB
0.8907

5776

PROCN superfamily
0.8907

19899

Bromodomain superfamily
0.8879

1255

Nic96 superfamily
0.8879

261777

MIF4G
0.8861

bd1221

(bd1221) recQ_fam
0.8835

13920

PAP_central
0.8817

35929

(MAPKKK) S_TKc
0.8808

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nucleoporin2 superfamily Nucleoporin autopeptidase; Nucleoporin autopeptidase. - 135.817 6.44E-37 654 - 790 superfamily 252369
Nucleoporin2 superfamily Nucleoporin autopeptidase; Nucleoporin autopeptidase. - 135.817 6.44E-37 654 - 790 superfamily 252369

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45854 PHATRDRAFT_45854 163777 64310 Not available Cre02.g086887.t1.1 AT1G10390.2 326004

KEGG

KEGG description KEGG Pathway
RNA transport map03013

GO Terms

GO:0005643 GO:0006810 -

GO:0005643

nuclear pore

Details: 
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
GO Category: 
CC

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

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