9271 CAP10 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9271 chr_12 CAP10 superfamily 1078793 1080629 - CAP10 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443212 Thaps9271.2, Thaps9271.3, Thaps9271.4, Thaps9271.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0067

Most Highly Correlated Transcripts

268257

fabG
0.9033

40200

TRX_reduct
0.8989

36007

Aldolase_II superfamily
0.8916

30701

PRK05279
0.8858

36366

Ape1-like_AP-endo
0.8846

40995

phr2
0.8797

261490

HemK
0.8774

23550

hypothetical protein
0.8773

263724

sigpep_I_bact
0.8749

7707

hypothetical protein
0.8709

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP10 superfamily Putative lipopolysaccharide-modifying enzyme; Putative lipopolysaccharide-modifying enzyme. - 89.0182 6.08E-20 194 - 423 superfamily 214773

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre09.g414150.t2.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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