bd1023 (bd1023) atpD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1023 bd_26x41 (bd1023) atpD 49470 50033 - atpD

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0065

Most Highly Correlated Transcripts

ThpsCp016

(atpD) ATP synthase CF1 delta subunit
1

bd598

(bd598) atpG
0.996

ThpsCp014

(atpG) ATP synthase CF0 B' subunit
0.996

bd1318

(bd1318) atpF
0.9956

ThpsCp015

(atpF) ATP synthase CF0 B subunit
0.9956

bd1290

(bd1290) atpH
0.9841

ThpsCp013

(atpH) ATP synthase CF0 C subunit
0.9841

bd1378

(bd1378) atpI
0.9836

ThpsCp012

(atpI) ATP synthase CF0 A subunit
0.9836

ThpsCt001

(trnM(cau))
0.9722

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
atpD ATP synthase CF1 delta subunit; Validated cl17210 271.088 1.01E-92 3 - 186 specific 177042
OSCP superfamily ATP synthase delta (OSCP) subunit; The ATP D subunit from Escherichia coli is the same as the OSCP... - 271.088 1.01E-92 3 - 186 superfamily 266559

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre11.g467569.t1.1 AT4G09650.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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