bd1487 (bd1487) PLN02688
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1487 bd_6x46 (bd1487) PLN02688 35043 36157 - PLN02688

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0486

Most Highly Correlated Transcripts

262307

BCCT
0.8734

35084

IF4E
0.8717

21719

NTPase_I-T superfamily
0.8575

36183

(GPA1) G-alpha
0.8557

36605

SufE superfamily
0.8488

36649

SufE superfamily
0.8488

261437

hypothetical protein
0.846

268902

cyclophilin superfamily
0.8446

2647

lysozyme_like superfamily
0.8387

5795

hypothetical protein
0.8339

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P5CR_dimer superfamily Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of two... - 161.772 2.81E-49 216 - 322 superfamily 258885
P5CR_dimer superfamily Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of two... - 161.772 2.81E-49 216 - 322 superfamily 258885
PLN02688 pyrroline-5-carboxylate reductase - 380.456 2.46E-132 52 - 323 multi-dom 178291

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16375 PHATRDRAFT_16375 191403 181511 61710 Not available Not available 345380

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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