bd392 (bd392) DEXDc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd392 bd_6x46 (bd392) DEXDc 13800 16366 - DEXDc

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0153

Most Highly Correlated Transcripts

24049

hypothetical protein
0.9666

9506

AAA_12
0.9641

7602

hypothetical protein
0.9605

11438

hypothetical protein
0.9588

6705

UPF0029 superfamily
0.9534

264122

TyrKc
0.9496

38240

HA
0.9466

31298

S_TKc
0.9464

261179

Myotub-related
0.9455

31599

MoCF_BD superfamily
0.9455

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 85.0816 5.57E-19 24 - 189 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 85.0816 5.57E-19 24 - 189 superfamily 266587
HA2 Helicase associated domain (HA2); This presumed domain is about 90 amino acid residues in length.... cl04503 63.3903 5.10E-12 518 - 566 specific 252575
HA2 superfamily Helicase associated domain (HA2); This presumed domain is about 90 amino acid residues in length.... - 63.3903 5.10E-12 518 - 566 superfamily 262181
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 84.851 1.93E-18 10 - 218 multi-dom 214692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 244804 328623 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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