13740 DUF221 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13740 chr_6 DUF221 superfamily 425155 428635 - DUF221 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451160 Thaps13740.1, Thaps13740.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0145
 0.29

Most Highly Correlated Transcripts

11371

hypothetical protein
0.9026

21655

hypothetical protein
0.8983

10873

NA
0.8961

261058

UDP-g_GGTase superfamily
0.8866

264346

(Tp_HSF_3.7b) HSF_DNA-bind
0.8859

262797

Sec7
0.8803

264937

hypothetical protein
0.8802

37638

HrpA
0.8799

261261

ArfGap
0.8784

261357

NAD_binding_8 superfamily
0.8777

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF221 superfamily Domain of unknown function DUF221; This family consists of hypothetical transmembrane proteins none... - 198.9 1.09E-56 450 - 755 superfamily 251491
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 101.044 2.55E-24 123 - 279 superfamily 258219
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 101.044 2.55E-24 123 - 279 superfamily 258219

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_1473 PHATRDRAFT_1473 203548 157306 Not available Not available AT1G30360.1 496772

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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