14890 Cupin_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14890 chr_9 Cupin_8 superfamily 780399 782691 - Cupin_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453072 Thaps14890.3, Thaps14890.2, Thaps14890.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0188
 0.22

Most Highly Correlated Transcripts

22441

hypothetical protein
0.9483

25120

U3_assoc_6 superfamily
0.9297

24015

Urb2 superfamily
0.9286

268486

Glyco_transf_22 superfamily
0.9274

20682

hypothetical protein
0.9167

264090

AAA_12
0.916

22296

hypothetical protein
0.9111

5666

Las1 superfamily
0.9038

38073

NAP
0.9031

268130

hypothetical protein
0.9027

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_8 superfamily Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. - 93.5686 1.90E-21 237 - 491 superfamily 267658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46234 PHATRDRAFT_46234 185380 264353 120660 Cre12.g485950.t1.2 AT5G06550.1 528617

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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