16503 AAA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16503 chr_18 AAA 317226 318560 + AAA

Synonyms

NCBI ID Ensembl Genomes exon ID
7444257 Thaps16503.3, Thaps16503.1, Thaps16503.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0211
 0.43

Most Highly Correlated Transcripts

267979

HCO3_cotransp superfamily
0.8488

263961

(Tp_Myb1R1) MYB DNA binding protein/ transcription factor-like protein
0.8258

20825

hypothetical protein
0.8133

1205

PKc_like superfamily
0.8104

41038

(P5CS) PLN02418
0.806

2622

hypothetical protein
0.8025

42133

CHD
0.7946

268661

(pab1) RRM_SF superfamily
0.7932

32480

AAA_12
0.7931

25031

hypothetical protein
0.7918

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 74.8751 6.92E-17 1 - 130 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 74.8751 6.92E-17 1 - 130 superfamily 267297
AAA ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety... - 70.0949 3.57E-15 1 - 128 multi-dom 214640

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32097 PHATRDRAFT_32097 185946 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

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