16952 MPP_PhoDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
16952	chr_2	MPP_PhoD	832809	834248	-	MPP_PhoD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450229	Thaps16952.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0028	0.44

Most Highly Correlated Transcripts

3230 hypothetical protein 0.852	8999 hypothetical protein 0.8332	9262 hypothetical protein 0.8267	3359 hypothetical protein 0.8236	6729 FUSC_2 0.8178	5807 hypothetical protein 0.8149
10064 DUF4476 0.8149	38602 Ndh 0.8141	2270 hypothetical protein 0.8137	29322 AAT_I superfamily 0.813

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPP_PhoD		Bacillus subtilis PhoD and related proteins, metallophosphatase domain; PhoD (also known as...	cl13995	97.8857	2.18E-23	17 - 342	specific	163632
MPP_superfamily superfamily		metallophosphatase superfamily, metallophosphatase domain; Metallophosphatases (MPPs), also known...	-	97.8857	2.18E-23	17 - 342	superfamily	265413

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48970	PHATRDRAFT_48970	192880	265005	248628	Not available	AT5G42370.1	487247

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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