10363 SET
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10363 chr_16a SET 141416 143102 + SET

Synonyms

NCBI ID Ensembl Genomes exon ID
7449977 Thaps10363.4, Thaps10363.3, Thaps10363.2, Thaps10363.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0418

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0103
 0.42

Most Highly Correlated Transcripts

bd690

(bd690) NA
0.9816

bd1934

(bd1934) NA
0.9356

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9233

bd1801

(bd1801) NA
0.9158

bd738

(bd738) NA
0.9147

bd643

(bd643) NA
0.9073

bd877

(bd877) NA
0.8949

bd737

(bd737) NA
0.8945

bd1840

(bd1840) NA
0.894

bd1946

(bd1946) NA
0.887

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SET SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... cl02566 60.2047 3.01E-11 132 - 265 specific 250181
SET superfamily SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be... - 60.2047 3.01E-11 132 - 265 superfamily 261347

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37549 Not available 203932 162739 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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