20769 RPE65 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20769	chr_1	RPE65 superfamily	1195100	1197087	+	RPE65 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451426	Thaps20769.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0187

Most Highly Correlated Transcripts

4772 hypothetical protein 0.9001	5624 hypothetical protein 0.8893	12899 AAA 0.8823	268443 SAICAR_synt_Sc 0.8814	20791 PP2Cc 0.8781	13448 Sec1 0.8738
1118 hypothetical protein 0.873	262287 hypothetical protein 0.871	23500 crypto_DASH 0.8705	260875 COG2220 0.8682

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RPE65 superfamily		Retinal pigment epithelial membrane protein; This family represents a retinal pigment epithelial...	-	236.744	5.31E-70	93 - 645	superfamily	263961

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48408	PHATRDRAFT_48408	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003834 -

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